Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Gm37917-201ENSMUST00000194711 392 ntBASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trem1Q9JKE2 Gm9860-201ENSMUST00000211426 3653 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm26185-201ENSMUST00000157692 266 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Proscos-202ENSMUST00000178990 666 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm9022-201ENSMUST00000182482 992 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm37042-201ENSMUST00000193816 581 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.31□□□□□ -0.76
Trem1Q9JKE2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trem1Q9JKE2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trem1Q9JKE2 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms