Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Mir449b-201ENSMUST00000104833 80 ntBASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm27321-201ENSMUST00000185021 205 ntBASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm8099-201ENSMUST00000200510 742 ntBASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Lect2-202ENSMUST00000225183 823 ntBASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Itm2b-204ENSMUST00000228637 783 ntBASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco4Q9JIS3 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm11573-201ENSMUST00000119956 394 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm27430-201ENSMUST00000184585 107 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm44333-201ENSMUST00000197168 107 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smco4Q9JIS3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms