Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Erich3-203ENSMUST00000189969 3460 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ube4bQ9ES00 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Gm1335-201ENSMUST00000121653 386 ntBASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Ube4bQ9ES00 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.08□□□□□ -0.64
Ube4bQ9ES00 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm12390-201ENSMUST00000117897 397 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm17150-201ENSMUST00000165577 381 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm38092-201ENSMUST00000195600 653 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm6439-201ENSMUST00000199849 862 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube4bQ9ES00 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms