Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gm3150-201ENSMUST00000166418 204 ntBASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf6Q9DBU5 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.4□□□□□ -0.43
Rnf6Q9DBU5 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf6Q9DBU5 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf6Q9DBU5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Gm15595-201ENSMUST00000120840 961 ntBASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Gm12407-201ENSMUST00000180219 324 ntBASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf6Q9DBU5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gm25732-201ENSMUST00000175168 60 ntBASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Erich3-203ENSMUST00000189969 3460 ntBASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf6Q9DBU5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms