Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp2aQ9DB34 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm9062-201ENSMUST00000117712 727 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm13611-201ENSMUST00000118269 318 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm38151-201ENSMUST00000195085 289 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm6867-201ENSMUST00000219165 425 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Ginm1-202ENSMUST00000065124 300 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp2aQ9DB34 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm15432-201ENSMUST00000121106 195 ntBASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm43378-201ENSMUST00000199336 582 ntBASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2aQ9DB34 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms