Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.56□□□□□ -0.4
Gtf3c6Q9D8P7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gm6082-201ENSMUST00000215204 454 ntBASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gtf3c6Q9D8P7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm14130-201ENSMUST00000118417 987 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm4310-201ENSMUST00000177847 889 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm28937-201ENSMUST00000185413 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm29400-201ENSMUST00000187208 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm28662-201ENSMUST00000188446 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm28251-201ENSMUST00000188835 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm37318-201ENSMUST00000194325 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm38117-201ENSMUST00000194653 939 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm38017-201ENSMUST00000194768 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm37287-201ENSMUST00000195449 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm37793-201ENSMUST00000195548 695 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm18038-201ENSMUST00000197900 485 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm43084-201ENSMUST00000200696 947 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm9797-202ENSMUST00000218003 294 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 CT009754.4-201ENSMUST00000221430 565 ntBASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf3c6Q9D8P7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms