Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12616-201ENSMUST00000118594 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm11960-201ENSMUST00000122068 925 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm7666-201ENSMUST00000146631 819 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm9550-201ENSMUST00000161130 862 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12624-201ENSMUST00000177615 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12621-201ENSMUST00000177760 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12615-201ENSMUST00000177970 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12622-201ENSMUST00000177975 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12627-201ENSMUST00000178412 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12625-201ENSMUST00000179122 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12614-201ENSMUST00000179586 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm12613-201ENSMUST00000180323 382 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps28Q9D1C8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Gm14193-201ENSMUST00000105067 153 ntBASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Gm11956-201ENSMUST00000119525 512 ntBASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Mir6546-201ENSMUST00000184460 62 ntBASIC11.86□□□□□ -0.51
Vps28Q9D1C8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.86□□□□□ -0.51
Vps28Q9D1C8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Gm22920-201ENSMUST00000102175 109 ntBASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Gm4726-201ENSMUST00000135604 736 ntBASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps28Q9D1C8 Gm6019-201ENSMUST00000148369 736 ntBASIC11.85□□□□□ -0.51
Vps28Q9D1C8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms