Protein–RNA interactions for Protein: Q9CWW7

Cxxc1, CXXC-type zinc finger protein 1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxxc1Q9CWW7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxxc1Q9CWW7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cxxc1Q9CWW7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm14247-201ENSMUST00000120950 237 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm20414-201ENSMUST00000172918 646 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm28833-201ENSMUST00000189671 559 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm18561-201ENSMUST00000206027 804 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm6562-201ENSMUST00000221903 464 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 AC165260.5-201ENSMUST00000224640 1247 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Cog3-203ENSMUST00000227473 4197 ntBASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cxxc1Q9CWW7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm14213-201ENSMUST00000119778 768 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm9089-201ENSMUST00000122027 526 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm26368-201ENSMUST00000157826 118 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm25998-201ENSMUST00000175397 53 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm37852-201ENSMUST00000193027 350 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm7082-201ENSMUST00000209880 969 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxxc1Q9CWW7 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxxc1Q9CWW7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxxc1Q9CWW7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms