Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm13392-201ENSMUST00000117708 150 ntBASIC10.95□□□□□ -0.66
Ska1Q9CPV1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm31256-201ENSMUST00000194705 506 ntBASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm10254-201ENSMUST00000052888 867 ntBASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm5419-201ENSMUST00000119301 527 ntBASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm14726-201ENSMUST00000120623 896 ntBASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm21769-201ENSMUST00000211922 111 ntBASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ska1Q9CPV1 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm43112-201ENSMUST00000196665 3122 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms