Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm14071-201ENSMUST00000117817 509 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm3329-201ENSMUST00000159873 556 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm7003-201ENSMUST00000195089 312 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm5714-201ENSMUST00000197343 566 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm45113-201ENSMUST00000207518 165 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Gm8385-201ENSMUST00000058999 643 ntBASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim11Q99PQ2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Gm14724-201ENSMUST00000118400 537 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Gm8566-201ENSMUST00000120174 465 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms