Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm12036-201ENSMUST00000120008 530 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm2260-201ENSMUST00000184965 657 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm18212-201ENSMUST00000211678 889 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm8385-201ENSMUST00000058999 643 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.33□□□□□ -0.6
Trim16Q99PP9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim16Q99PP9 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm26286-201ENSMUST00000104166 134 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Mir433-201ENSMUST00000093564 124 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.32□□□□□ -0.6
Trim16Q99PP9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim16Q99PP9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms