Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim33Q99PP7 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Gm11509-201ENSMUST00000117358 325 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Mir7677-201ENSMUST00000184226 67 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.6□□□□□ -0.55
Trim33Q99PP7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim33Q99PP7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm11660-201ENSMUST00000120955 412 ntBASIC11.59□□□□□ -0.55
Trim33Q99PP7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm35960-201ENSMUST00000202712 767 ntBASIC11.59□□□□□ -0.55
Trim33Q99PP7 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC11.59□□□□□ -0.55
Trim33Q99PP7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm45733-201ENSMUST00000212988 437 ntBASIC11.59□□□□□ -0.55
Trim33Q99PP7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm26448-201ENSMUST00000082446 203 ntBASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms