Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sf3b1Q99NB9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm25766-201ENSMUST00000104101 131 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm7504-201ENSMUST00000201449 424 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm23105-201ENSMUST00000083719 134 ntBASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sf3b1Q99NB9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sf3b1Q99NB9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm11960-201ENSMUST00000122068 925 ntBASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm44158-201ENSMUST00000203881 505 ntBASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms