Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm21092-201ENSMUST00000178995 955 ntBASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.19□□□□□ -0.78
Scrt1Q99M85 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.19□□□□□ -0.78
Scrt1Q99M85 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Scrt1Q99M85 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm13549-201ENSMUST00000118339 796 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm3551-201ENSMUST00000190750 664 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm4604-201ENSMUST00000025040 390 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.18□□□□□ -0.78
Scrt1Q99M85 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Scrt1Q99M85 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms