Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.19□□□□□ -0.62
Cstf3Q99LI7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm11500-201ENSMUST00000118237 601 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm13350-201ENSMUST00000120519 479 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm17376-201ENSMUST00000166016 84 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm5982-201ENSMUST00000196234 512 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm270-201ENSMUST00000223010 976 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm26448-201ENSMUST00000082446 203 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.18□□□□□ -0.62
Cstf3Q99LI7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm14130-201ENSMUST00000118417 987 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm26047-201ENSMUST00000157308 113 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm7584-201ENSMUST00000175829 940 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm37666-201ENSMUST00000194110 866 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm26047-202ENSMUST00000198840 115 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm45433-201ENSMUST00000209386 247 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm6082-201ENSMUST00000215204 454 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 Gm7940-201ENSMUST00000218195 769 ntBASIC11.17□□□□□ -0.62
Cstf3Q99LI7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms