Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm23200-201ENSMUST00000104379 132 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm7851-201ENSMUST00000117574 323 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm11450-201ENSMUST00000121144 333 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm29499-201ENSMUST00000189151 486 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm28329-201ENSMUST00000191208 689 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm29171-201ENSMUST00000191397 486 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm6653-201ENSMUST00000218063 1288 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Gm37969-201ENSMUST00000195777 3409 ntBASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb1Q91Y08 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm14058-201ENSMUST00000116082 735 ntBASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm7857-201ENSMUST00000117957 358 ntBASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb1Q91Y08 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms