Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Gm15374-201ENSMUST00000119313 844 ntBASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Mir483-201ENSMUST00000093631 73 ntBASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb5Q91XZ5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Gm15528-201ENSMUST00000117821 864 ntBASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Gm11980-201ENSMUST00000121445 986 ntBASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Mt1-202ENSMUST00000211807 1085 ntBASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Gm18968-201ENSMUST00000221319 862 ntBASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb5Q91XZ5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Gm8302-201ENSMUST00000119217 852 ntBASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Gm21778-201ENSMUST00000178779 471 ntBASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Gm7082-201ENSMUST00000209880 969 ntBASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb5Q91XZ5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.58□□□□□ -0.23
Pcdhb5Q91XZ5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.58□□□□□ -0.23
Pcdhb5Q91XZ5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb5Q91XZ5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb5Q91XZ5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb5Q91XZ5 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb5Q91XZ5 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms