Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Erich3-203ENSMUST00000189969 3460 ntBASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb6Q91XZ4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm4909-201ENSMUST00000118749 794 ntBASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm15566-201ENSMUST00000121130 590 ntBASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm24844-201ENSMUST00000158679 127 ntBASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm37835-201ENSMUST00000193305 361 ntBASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms