Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx41Q91VN6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gm7666-201ENSMUST00000146631 819 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gm8815-201ENSMUST00000173809 620 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ddx41Q91VN6 Gm37368-201ENSMUST00000193173 3212 ntBASIC13.32□□□□□ -0.28
Ddx41Q91VN6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm11956-201ENSMUST00000119525 512 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm4726-201ENSMUST00000135604 736 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm6019-201ENSMUST00000148369 736 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm17831-201ENSMUST00000205579 900 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm17931-201ENSMUST00000208132 634 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gm6867-201ENSMUST00000219165 425 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ddx41Q91VN6 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms