Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Gm9673-201ENSMUST00000119287 781 ntBASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Gm24248-201ENSMUST00000157321 322 ntBASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Gm21778-201ENSMUST00000178779 471 ntBASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp7Q8R1T1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm11560-201ENSMUST00000117567 948 ntBASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm15528-201ENSMUST00000117821 864 ntBASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm15197-201ENSMUST00000120526 478 ntBASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm12791-201ENSMUST00000120788 655 ntBASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm19891-201ENSMUST00000189771 303 ntBASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp7Q8R1T1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm13549-201ENSMUST00000118339 796 ntBASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm8302-201ENSMUST00000119217 852 ntBASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm12783-201ENSMUST00000121425 397 ntBASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm18463-201ENSMUST00000207258 474 ntBASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm18460-201ENSMUST00000208088 464 ntBASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp7Q8R1T1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms