Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Gm14127-201ENSMUST00000117906 678 ntBASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Gm18187-201ENSMUST00000196476 984 ntBASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm11591-201ENSMUST00000120063 702 ntBASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm13875-201ENSMUST00000120162 282 ntBASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm28882-201ENSMUST00000185504 314 ntBASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm45384-201ENSMUST00000210451 277 ntBASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm9996-201ENSMUST00000070359 913 ntBASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ebf4Q8K4J2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm12463-201ENSMUST00000118271 849 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm12058-201ENSMUST00000118614 437 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm24644-201ENSMUST00000157114 139 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms