Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.66□□□□□ -0.54
Clip4Q8CI96 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.66□□□□□ -0.54
Clip4Q8CI96 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 AU022133-201ENSMUST00000200601 873 ntBASIC11.66□□□□□ -0.54
Clip4Q8CI96 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.66□□□□□ -0.54
Clip4Q8CI96 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Erich3-203ENSMUST00000189969 3460 ntBASIC11.66□□□□□ -0.54
Clip4Q8CI96 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clip4Q8CI96 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gm26286-201ENSMUST00000104166 134 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gm5419-201ENSMUST00000119301 527 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Mir3102-201ENSMUST00000175555 104 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gm43184-201ENSMUST00000197247 542 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clip4Q8CI96 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.65□□□□□ -0.54
Clip4Q8CI96 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms