Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm12463-201ENSMUST00000118271 849 ntBASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm37424-201ENSMUST00000191727 561 ntBASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc28aQ8CEI3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc28aQ8CEI3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Ccdc28aQ8CEI3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc28aQ8CEI3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm32999-201ENSMUST00000192693 562 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Gm9823-201ENSMUST00000051212 327 ntBASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc28aQ8CEI3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms