Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc28bQ8CEG5 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Gm12390-201ENSMUST00000117897 397 ntBASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms