Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm22042-201ENSMUST00000082989 165 ntBASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm26110-201ENSMUST00000083971 165 ntBASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfsfm13Q8BXS2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm22133-201ENSMUST00000102082 109 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm11660-201ENSMUST00000120955 412 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm27627-201ENSMUST00000183644 150 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm17812-201ENSMUST00000204935 318 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfsfm13Q8BXS2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm26286-201ENSMUST00000104166 134 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm11700-201ENSMUST00000119409 403 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm29615-201ENSMUST00000185371 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm28224-201ENSMUST00000186078 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm29001-201ENSMUST00000186177 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm28292-201ENSMUST00000186593 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm28101-201ENSMUST00000187608 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm29076-201ENSMUST00000187689 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm28302-201ENSMUST00000187931 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm28646-201ENSMUST00000188220 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm28205-201ENSMUST00000189177 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm29032-201ENSMUST00000189797 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm28695-201ENSMUST00000190300 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Gm37448-201ENSMUST00000192795 697 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfsfm13Q8BXS2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms