Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rd3Q8BRE0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gm13422-201ENSMUST00000118834 504 ntBASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gm12990-201ENSMUST00000120372 468 ntBASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gm9135-201ENSMUST00000182963 990 ntBASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gm42599-201ENSMUST00000201308 469 ntBASIC12.25□□□□□ -0.45
Rd3Q8BRE0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Rd3Q8BRE0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm11801-201ENSMUST00000117807 746 ntBASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm10169-201ENSMUST00000121822 348 ntBASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm5805-201ENSMUST00000072779 456 ntBASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rd3Q8BRE0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms