Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Gm18711-201ENSMUST00000199341 750 ntBASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Gm6180-201ENSMUST00000065243 498 ntBASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm5706-201ENSMUST00000181525 993 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm42937-201ENSMUST00000197360 752 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms