Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Rps4l-202ENSMUST00000204242 789 ntBASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Gm21769-201ENSMUST00000211922 111 ntBASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cdhr3Q8BL00 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm3329-201ENSMUST00000159873 556 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm17420-201ENSMUST00000164753 153 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm38117-201ENSMUST00000194653 939 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm6334-201ENSMUST00000207083 228 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Gm9368-201ENSMUST00000219348 831 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms