Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Mir7085-201ENSMUST00000184353 66 ntBASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gm8885-201ENSMUST00000189382 598 ntBASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gm10478-201ENSMUST00000084451 396 ntBASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chmp2bQ8BJF9 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Chmp2bQ8BJF9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp2bQ8BJF9 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms