Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm26286-201ENSMUST00000104166 134 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm14109-201ENSMUST00000118814 309 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm27320-201ENSMUST00000184892 109 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm8956-201ENSMUST00000203939 825 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm19187-201ENSMUST00000206781 892 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm45224-201ENSMUST00000208203 414 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf38Q8BI21 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm45598-202ENSMUST00000210719 986 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf38Q8BI21 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms