Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm10582-201ENSMUST00000097987 396 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm10583-201ENSMUST00000097988 396 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm11960-201ENSMUST00000122068 925 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm5335-201ENSMUST00000182995 1000 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm17944-201ENSMUST00000186351 643 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Gm44814-201ENSMUST00000207018 434 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Ttc28Q80XJ3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Gm5421-201ENSMUST00000181698 2354 ntBASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Gm15519-201ENSMUST00000120088 1566 ntBASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ttc28Q80XJ3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm23439-201ENSMUST00000104292 132 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm20495-201ENSMUST00000173902 235 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm7069-201ENSMUST00000182418 1008 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm37851-201ENSMUST00000193871 889 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Gm37207-201ENSMUST00000194284 296 ntBASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Ttc28Q80XJ3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms