Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm25766-201ENSMUST00000104101 131 ntBASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm15615-201ENSMUST00000118876 198 ntBASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm11244-201ENSMUST00000121243 237 ntBASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm12628-201ENSMUST00000122193 382 ntBASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm6114-201ENSMUST00000182472 968 ntBASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.08□□□□□ -0.64
Vrk1Q80X41 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vrk1Q80X41 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm5100-201ENSMUST00000195631 589 ntBASIC11.07□□□□□ -0.64
Vrk1Q80X41 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm5298-201ENSMUST00000201122 892 ntBASIC11.07□□□□□ -0.64
Vrk1Q80X41 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.07□□□□□ -0.64
Vrk1Q80X41 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm25517-201ENSMUST00000083865 134 ntBASIC11.07□□□□□ -0.64
Vrk1Q80X41 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.07□□□□□ -0.64
Vrk1Q80X41 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vrk1Q80X41 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms