Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm13183-201ENSMUST00000118615 789 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm12208-201ENSMUST00000122004 163 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm8459-201ENSMUST00000162504 760 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm8365-201ENSMUST00000197334 648 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm8285-201ENSMUST00000208293 759 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Pck2-205ENSMUST00000226352 2784 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh19Q80TF3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pcdh19Q80TF3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh19Q80TF3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pcdh19Q80TF3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdh19Q80TF3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gm11960-201ENSMUST00000122068 925 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Mir7076-201ENSMUST00000183519 74 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Mir8115-201ENSMUST00000184992 119 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gm45219-201ENSMUST00000205602 465 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdh19Q80TF3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms