Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gm12516-201ENSMUST00000120819 385 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gm24844-201ENSMUST00000158679 127 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gm37299-201ENSMUST00000193951 826 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gm45113-201ENSMUST00000207518 165 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh8Q7TSK3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm1848-201ENSMUST00000120711 789 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm7150-201ENSMUST00000122032 981 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Mir7076-201ENSMUST00000183519 74 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Mir8115-201ENSMUST00000184992 119 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm44980-201ENSMUST00000205826 314 ntBASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh8Q7TSK3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh8Q7TSK3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms