Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ctdp1Q7TSG2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdp1Q7TSG2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm14109-201ENSMUST00000118814 309 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm11960-201ENSMUST00000122068 925 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm15276-201ENSMUST00000145953 498 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm17376-201ENSMUST00000166016 84 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm26461-201ENSMUST00000175064 290 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm6114-201ENSMUST00000182472 968 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Lect2-202ENSMUST00000225183 823 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdp1Q7TSG2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm25890-201ENSMUST00000177643 165 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm22614-201ENSMUST00000178300 165 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm22042-201ENSMUST00000082989 165 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Gm26110-201ENSMUST00000083971 165 ntBASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdp1Q7TSG2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms