Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Mir7076-201ENSMUST00000183519 74 ntBASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Gm44545-201ENSMUST00000208262 746 ntBASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nphp3Q7TNH6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm12247-201ENSMUST00000117585 670 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm14942-201ENSMUST00000119642 336 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm12208-201ENSMUST00000122004 163 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm22138-201ENSMUST00000158748 128 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm6485-201ENSMUST00000160676 439 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm27910-201ENSMUST00000185004 107 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nphp3Q7TNH6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nphp3Q7TNH6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Gm4294-201ENSMUST00000105169 614 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Gm9645-201ENSMUST00000197131 792 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Gm8365-201ENSMUST00000197334 648 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Gm44315-201ENSMUST00000203041 219 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.02□□□□□ -0.17
Nphp3Q7TNH6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms