Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm9133-201ENSMUST00000118289 540 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm13039-201ENSMUST00000118638 794 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm25343-201ENSMUST00000157460 107 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm17221-201ENSMUST00000163909 481 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm17073-201ENSMUST00000168069 556 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm25998-201ENSMUST00000175397 53 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm9102-201ENSMUST00000219250 465 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Snord23-201ENSMUST00000116828 109 ntBASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Gm43752-201ENSMUST00000198475 697 ntBASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Gm14005-208ENSMUST00000223654 681 ntBASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx55Q6ZPL9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm9372-201ENSMUST00000168454 430 ntBASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm42660-201ENSMUST00000197733 947 ntBASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm43969-201ENSMUST00000204833 535 ntBASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm4903-201ENSMUST00000210462 405 ntBASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms