Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Gm11793-201ENSMUST00000120433 981 ntBASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Gm15547-201ENSMUST00000122152 333 ntBASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Gm26956-201ENSMUST00000182176 986 ntBASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Scaf4Q6PFF0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm5187-201ENSMUST00000117317 991 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm14071-201ENSMUST00000117817 509 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm2553-201ENSMUST00000215986 605 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm5705-201ENSMUST00000066241 711 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms