Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm15196-201ENSMUST00000121406 482 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm14165-201ENSMUST00000121456 952 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm37852-201ENSMUST00000193027 350 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Matn2-203ENSMUST00000226766 3252 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm15036-201ENSMUST00000118880 400 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm14993-201ENSMUST00000121180 164 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Mir1893-201ENSMUST00000122565 83 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm24328-201ENSMUST00000175104 67 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm18014-201ENSMUST00000183369 817 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm37365-201ENSMUST00000193109 409 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm5178-201ENSMUST00000219380 898 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.38□□□□□ -0.27
Nup98Q6PFD9 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm12453-201ENSMUST00000121981 331 ntBASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm25545-201ENSMUST00000122673 323 ntBASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm6855-201ENSMUST00000206307 790 ntBASIC13.38□□□□□ -0.27
Nup98Q6PFD9 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup98Q6PFD9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Ighv13-1-201ENSMUST00000103480 294 ntBASIC13.37□□□□□ -0.27
Nup98Q6PFD9 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms