Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm23400-201ENSMUST00000174994 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm26463-201ENSMUST00000175065 101 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm24332-201ENSMUST00000175102 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm25959-201ENSMUST00000175112 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm22475-201ENSMUST00000175169 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm22903-201ENSMUST00000175193 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm25070-201ENSMUST00000175237 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm24159-201ENSMUST00000175264 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm25299-201ENSMUST00000175283 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm23798-201ENSMUST00000175560 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm23802-201ENSMUST00000175565 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm25708-201ENSMUST00000177687 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm24370-201ENSMUST00000178007 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm23049-201ENSMUST00000178068 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm28019-201ENSMUST00000178138 101 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm25571-201ENSMUST00000178322 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm25355-201ENSMUST00000178456 101 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm24975-201ENSMUST00000178492 101 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm23189-201ENSMUST00000178954 102 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm25100-201ENSMUST00000179750 101 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm23064-201ENSMUST00000179866 101 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Snrnp40Q6PE01 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms