Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rnf220Q6PDX6 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm13315-201ENSMUST00000120376 991 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm16177-201ENSMUST00000120728 718 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm1335-201ENSMUST00000121653 386 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Gm6007-201ENSMUST00000208170 823 ntBASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.94□□□□□ -0.66
Rnf220Q6PDX6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms