Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm32999-201ENSMUST00000192693 562 ntBASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm43962-201ENSMUST00000203898 190 ntBASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm2553-201ENSMUST00000215986 605 ntBASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smarcd3Q6P9Z1 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.58□□□□□ -0.71
Smarcd3Q6P9Z1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm26286-201ENSMUST00000104166 134 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm8885-201ENSMUST00000189382 598 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Rprl1-202ENSMUST00000198476 238 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm43179-201ENSMUST00000198797 275 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm807-202ENSMUST00000224929 408 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm10254-201ENSMUST00000052888 867 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smarcd3Q6P9Z1 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms