Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp49Q6P9L4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp49Q6P9L4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm7851-201ENSMUST00000117574 323 ntBASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm7857-201ENSMUST00000117957 358 ntBASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm4909-201ENSMUST00000118749 794 ntBASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm25732-201ENSMUST00000175168 60 ntBASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm37246-201ENSMUST00000192665 835 ntBASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm43966-201ENSMUST00000203301 612 ntBASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp49Q6P9L4 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Btrc-209ENSMUST00000224478 2194 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm14058-201ENSMUST00000116082 735 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm13263-201ENSMUST00000121271 838 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm19208-201ENSMUST00000213861 912 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp49Q6P9L4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp49Q6P9L4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms