Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm42732-201ENSMUST00000202887 1197 ntBASIC17.53■□□□□ 0.4
Slx4Q6P1D7 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Gm9644-201ENSMUST00000212828 1183 ntBASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slx4Q6P1D7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slx4Q6P1D7 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Gm29164-201ENSMUST00000185454 1024 ntBASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Gm45416-201ENSMUST00000209713 2201 ntBASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slx4Q6P1D7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC17.52■□□□□ 0.39
Slx4Q6P1D7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Gm42498-201ENSMUST00000199981 1372 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 n-R5s130-201ENSMUST00000178128 119 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Gm24312-201ENSMUST00000178677 119 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 n-R5s106-201ENSMUST00000179060 119 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 n-R5s118-201ENSMUST00000179887 119 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Gm44498-201ENSMUST00000199509 111 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Wbp1-209ENSMUST00000205023 716 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC17.51■□□□□ 0.39
Slx4Q6P1D7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slx4Q6P1D7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Gm22495-201ENSMUST00000104492 126 ntBASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Gm14006-201ENSMUST00000122132 981 ntBASIC17.5■□□□□ 0.39
Slx4Q6P1D7 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms