Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
VcanQ62059 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
VcanQ62059 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC10.52□□□□□ -0.72
VcanQ62059 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC10.52□□□□□ -0.73
VcanQ62059 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Gm37284-201ENSMUST00000193607 539 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm25580-201ENSMUST00000083409 327 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.52□□□□□ -0.73
VcanQ62059 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.52□□□□□ -0.73
VcanQ62059 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Gm8163-201ENSMUST00000122020 1060 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm25154-201ENSMUST00000157123 119 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.52□□□□□ -0.73
VcanQ62059 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VcanQ62059 Gm29783-201ENSMUST00000219398 369 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
VcanQ62059 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.52□□□□□ -0.73
VcanQ62059 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.52□□□□□ -0.73
VcanQ62059 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
VcanQ62059 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
VcanQ62059 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
VcanQ62059 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Gm11295-201ENSMUST00000121379 803 ntBASIC10.51□□□□□ -0.73
VcanQ62059 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VcanQ62059 Gm26931-201ENSMUST00000182273 609 ntBASIC10.51□□□□□ -0.73
VcanQ62059 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.51□□□□□ -0.73
VcanQ62059 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.51□□□□□ -0.73
VcanQ62059 AC134607.1-201ENSMUST00000214707 485 ntBASIC10.51□□□□□ -0.73
VcanQ62059 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.51□□□□□ -0.73
VcanQ62059 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.51□□□□□ -0.73
VcanQ62059 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC10.51□□□□□ -0.73
VcanQ62059 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VcanQ62059 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VcanQ62059 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VcanQ62059 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VcanQ62059 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.51□□□□□ -0.73
VcanQ62059 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VcanQ62059 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.51□□□□□ -0.73
VcanQ62059 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.51□□□□□ -0.73
VcanQ62059 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC10.51□□□□□ -0.73
VcanQ62059 AC155293.1-201ENSMUST00000219793 1026 ntBASIC10.51□□□□□ -0.73
VcanQ62059 AC122356.2-201ENSMUST00000226962 820 ntBASIC10.51□□□□□ -0.73
VcanQ62059 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VcanQ62059 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.51□□□□□ -0.73
VcanQ62059 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
VcanQ62059 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VcanQ62059 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VcanQ62059 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
VcanQ62059 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms