Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ift88Q61371 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.75□□□□□ -0.37
Ift88Q61371 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm8343-201ENSMUST00000182705 994 ntBASIC12.75□□□□□ -0.37
Ift88Q61371 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.75□□□□□ -0.37
Ift88Q61371 Mir7085-201ENSMUST00000184353 66 ntBASIC12.75□□□□□ -0.37
Ift88Q61371 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.75□□□□□ -0.37
Ift88Q61371 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.75□□□□□ -0.37
Ift88Q61371 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm45865-201ENSMUST00000211815 945 ntBASIC12.75□□□□□ -0.37
Ift88Q61371 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.75□□□□□ -0.37
Ift88Q61371 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.75□□□□□ -0.37
Ift88Q61371 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ift88Q61371 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.75□□□□□ -0.37
Ift88Q61371 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ift88Q61371 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.74□□□□□ -0.37
Ift88Q61371 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.74□□□□□ -0.37
Ift88Q61371 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.74□□□□□ -0.37
Ift88Q61371 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm17827-201ENSMUST00000211825 742 ntBASIC12.74□□□□□ -0.37
Ift88Q61371 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm7940-201ENSMUST00000218195 769 ntBASIC12.74□□□□□ -0.37
Ift88Q61371 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Cts7-204ENSMUST00000225321 1257 ntBASIC12.74□□□□□ -0.37
Ift88Q61371 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.74□□□□□ -0.37
Ift88Q61371 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ift88Q61371 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ift88Q61371 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms