Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm12419-201ENSMUST00000116649 636 ntBASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm16166-201ENSMUST00000118291 787 ntBASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Olfr584-201ENSMUST00000098210 964 ntBASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm8574-201ENSMUST00000203207 924 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm17831-201ENSMUST00000205579 900 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm17825-201ENSMUST00000206836 794 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm45118-201ENSMUST00000208928 825 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nlrc4Q3UP24 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.17□□□□□ -0.46
Nlrc4Q3UP24 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms