Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Gm11509-201ENSMUST00000117358 325 ntBASIC13.62□□□□□ -0.23
Limch1Q3UH68 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Gm4310-201ENSMUST00000177847 889 ntBASIC13.62□□□□□ -0.23
Limch1Q3UH68 Mir6546-201ENSMUST00000184460 62 ntBASIC13.62□□□□□ -0.23
Limch1Q3UH68 Gm6905-201ENSMUST00000205729 511 ntBASIC13.62□□□□□ -0.23
Limch1Q3UH68 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limch1Q3UH68 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gm13888-201ENSMUST00000119148 422 ntBASIC13.61□□□□□ -0.23
Limch1Q3UH68 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gm38117-201ENSMUST00000194653 939 ntBASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Limch1Q3UH68 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.6□□□□□ -0.23
Limch1Q3UH68 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Gm14724-201ENSMUST00000118400 537 ntBASIC13.6□□□□□ -0.23
Limch1Q3UH68 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Gm20614-201ENSMUST00000177106 632 ntBASIC13.6□□□□□ -0.23
Limch1Q3UH68 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Limch1Q3UH68 Gm8100-201ENSMUST00000182906 988 ntBASIC13.6□□□□□ -0.23
Limch1Q3UH68 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms