Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tff1Q08423 Gm11628-201ENSMUST00000117568 171 ntBASIC9.62□□□□□ -0.87
Tff1Q08423 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.62□□□□□ -0.87
Tff1Q08423 Gm7467-201ENSMUST00000185173 652 ntBASIC9.62□□□□□ -0.87
Tff1Q08423 Gm8885-201ENSMUST00000189382 598 ntBASIC9.62□□□□□ -0.87
Tff1Q08423 Gm37835-201ENSMUST00000193305 361 ntBASIC9.62□□□□□ -0.87
Tff1Q08423 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.62□□□□□ -0.87
Tff1Q08423 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Tff1Q08423 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tff1Q08423 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Tff1Q08423 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Tff1Q08423 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.62□□□□□ -0.87
Tff1Q08423 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.62□□□□□ -0.87
Tff1Q08423 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.62□□□□□ -0.87
Tff1Q08423 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tff1Q08423 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.61□□□□□ -0.87
Tff1Q08423 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.61□□□□□ -0.87
Tff1Q08423 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Tff1Q08423 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm11989-201ENSMUST00000117240 672 ntBASIC9.61□□□□□ -0.87
Tff1Q08423 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm11362-201ENSMUST00000118838 850 ntBASIC9.61□□□□□ -0.87
Tff1Q08423 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.61□□□□□ -0.87
Tff1Q08423 Gm11700-201ENSMUST00000119409 403 ntBASIC9.61□□□□□ -0.87
Tff1Q08423 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.61□□□□□ -0.87
Tff1Q08423 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.61□□□□□ -0.87
Tff1Q08423 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.61□□□□□ -0.87
Tff1Q08423 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm10312-201ENSMUST00000078515 489 ntBASIC9.61□□□□□ -0.87
Tff1Q08423 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tff1Q08423 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tff1Q08423 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms