Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Gm13600-201ENSMUST00000117949 744 ntBASIC11.76□□□□□ -0.53
Ebf1Q07802 Gm14219-201ENSMUST00000120414 288 ntBASIC11.76□□□□□ -0.53
Ebf1Q07802 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.76□□□□□ -0.53
Ebf1Q07802 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.76□□□□□ -0.53
Ebf1Q07802 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Gm45594-201ENSMUST00000211717 241 ntBASIC11.76□□□□□ -0.53
Ebf1Q07802 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.76□□□□□ -0.53
Ebf1Q07802 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ebf1Q07802 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ebf1Q07802 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ebf1Q07802 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm24398-201ENSMUST00000157870 109 ntBASIC11.75□□□□□ -0.53
Ebf1Q07802 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm8531-201ENSMUST00000188319 893 ntBASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm17931-201ENSMUST00000208132 634 ntBASIC11.75□□□□□ -0.53
Ebf1Q07802 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.75□□□□□ -0.53
Ebf1Q07802 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.75□□□□□ -0.53
Ebf1Q07802 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm23680-201ENSMUST00000083162 164 ntBASIC11.75□□□□□ -0.53
Ebf1Q07802 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.75□□□□□ -0.53
Ebf1Q07802 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ebf1Q07802 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ebf1Q07802 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms